Plant Genetics

Publications by Dr. Maughan

Mallory MA, Pratt DB, Vivas R, Jellen EN, Maughan PJ* (2008) Development and Characterization of Microsatellite Markers for the Grain Amaranths (Amaranthus spp. L.).  Crop Sci. (Accepted)

Jarvis DE, Kopp OR , Jellen EN, Mallory MA, Pattee J, Bonifacio A, Coleman CE, Stevens MR, Fairbanks DJ, Maughan PJ* (2008) Simple Sequence Repeat Development, Polymorphism and Genetic Mapping in Quinoa (Chenopodium quinoa Willd.).  J. Genetics (Accepted)

Balzotti MRB, Thornton JN, Maughan PJ, McClellan DA, Stevens MR, Jellen EN, Fairbanks DJ, Coleman CE (2007) Expression and evolutionary relationships of the Chenopodium quinoa 11S seed storage protein gene.  Int. J. Plant Sci.169(2):281-291.

Maughan PJ*, Sisneros N, Luo M, Kudrna D, Ammiraju JSS, Wing RA (2008) Construction of an amaranth (Amaranthus hypochondriacus) bacterial artificial chromosome library and genomic sequencing of herbicide target genes.  Crop Sci. 48:S-85-94

Christensen, SA, Pratt DB, C. Pratt, P.T. Nelson, Stevens MR, Coleman CE, Fairbanks DJ, Jellen EN, Bonifacio A, Maughan PJ* (2007) Assessment of genetic diversity in the USDA collections of quinoa (Chenopodium quinoa Willd.) using microsatellite markers.  Plant Genet. Resour. 5: 82-95

Maughan PJ*, Kolano BA, Maluszynska J, Coles ND, Bonifacio A, Rojas J, Coleman CE, Stevens MR, Fairbanks DJ, Parkinson SE, Jellen EN (2006)  Molecular and Cytological Characterization of Ribosomal DNAs in Chenopodium quinoa and Chenopodium berlandieri.  Genome 49: 825-839

Stevens MR, Coleman CE, Parkinson SE, Maughan PJ, Zhang H.-B, Balzotti MR, Kooyman DL, Arumuganathan K, Bonifacio A, Fairbanks DJ, Jellen EN, Stevens JJ (2006) Construction of a quinoa (Chenopodium quinoa Willd.) BAC library and its use in identifying genes encoding seed storage proteins. Theor. Appl. Genet. 112: 1593-1600

Fairbanks DJ, Maughan PJ (2006)  Evolution of the NANOG pseudogene family in the human and chimpanzee genomes.  BMC Evol. Biol. 6:12

Mason SL, Stevens MR, Jellen EN, Bonifacio A, Fairbanks DJ, McCarty RR, Rasmussen AG, Maughan PJ* (2005).  Development and Use of Microsatellite Markers for Germplasm Characterization in Quinoa (Chenopodium quinoa Willd.)  Crop Sci. 45:1618-1630

Coles ND, Coleman CE, Christensen SA, Jellen EN, Stevens MR, Bonifacio A, Rojas-Beltran JA, Fairbanks DJ, Maughan PJ*. (2004)  Development and Use of an Expressed Sequenced Tag Library in Quinoa (Chenopodium quinoa Willd.) for the Discovery of Single Nucleotide Polymorphisms.  Plant Sci. 168:439-447

Maughan PJ*, Bonifacio A, Jellen EN, Stevens MR, Coleman CE, Ricks M, Mason SL, Jarvis DE, Gardunia BW, Fairbanks DJ. (2004) A Genetic Linkage Map of Quinoa (Chenopodium quinoa) based on AFLP, RAPD and SSR markers.  Theor. Appl. Genet. 109:1188-1195

Jeong SC, Kristipati S, Hayes, AJ,  Maughan PJ, Noffsinger SL, Grunduz I, Buss GR, and Saghai Maroof MA. (2002).  Genetic and sequence analysis of markers tightly linked to the soybean mosaic virus resistance gene, Rsv3. Crop Sci. 42:265-270

Coello P, Maughan PJ, Mendoza A, Philip R, Bollinger D, Veum TL, Vodkin, LO, Polacco JC (2001)  Generation of low phytic acid Arabidopsis seeds expressing an E. coli phytase during embryo development.  Seed Sci. Res. 11:  285-291

Philip R, Darnowski D, Maughan PJ, Vodkin LO (2001)  Processing and localization of bovine B-casein expressed in transgenic soybean seeds under control of a soybean lectin expression cassette.  Plant Sci. 161: 323-335

Maughan PJ, Saghai Maroof MA, Buss GR (2000)  Identification of quantitative trait loci (QTL) affecting seed sucrose content in Soybean (Glycine max).  Mol. Breed. 6: 105-111.

Maughan PJ, Philip R, Cho M-J., Widholm JM, Vodkin LO (1999)  Biolistic Transformation, Expression and inheritance of bovine ß-Casein in soybean (Glycine max). In Vitro Cell. Dev. Biol.35:344-349

Wang S, Zhang Q, Maughan PJ, Saghai Maroof MA (1997)  Copia-like retrotransposons in rice:  sequence heterogeneity, species distribution and chromosomal locations.  Plant Mol. Biol. 33:1051-1058

Biyashev RM, Ragab RA, Maughan PJ, Saghai Maroof, MA (1997)  Molecular mapping, chromosomal assignment, and genetic diversity analysis of phytochrome loci in Barley (Hordeum vulgare).  J. Hered. 88:21-26

Maughan PJ, Saghai Maroof MA, Buss GR (1996)  Molecular-marker analysis of seed-weight:  genomic locations, gene action and evidence for orthologous evolution among three legume species.  Theor. Appl. Genet. 93:574-579

Maughan PJ, Saghai Maroof MA, Buss GR, Huestis, GM (1996)  Amplified fragment length polymorphism (AFLP) in soybean: species diversity, inheritance, and near-isogenic line analysis.  Theor. Appl. Genet.  93:392-401

Saghai Maroof MA, Yang GP, Biyashev RM, Maughan PJ, Zhang Q (1996)  Analysis of the barley and rice genomes by comparative RFLP linkage mapping.  Theor. Appl. Genet. 92:541-551

Maughan PJ, Saghai Maroof MA, Buss GR (1995)  Microsatellite and amplified sequence length polymorphism in cultivated and wild soybean.  Genome 38: 715-723

Yu YG, Saghai Maroof MA, Buss GR, Maughan PJ, Tolin SA (1994)  RFLP and microsatellite mapping of a gene for virus resistance in soybean.  Phytopathology 84:60-64

Fairbanks DJ Waldrigues A, Ruas CF, Maughan PJ, Robison LR, Andersen WR, Riede CR, Pauley CS, Caetano LG, Arantes OMN, Fungaro MHP, Vidotto MC, Jankevicius SE (1993)  Efficient characterization of biological diversity using field DNA extraction and random amplified polymorphic DNA markers.  Rev. Brazil. Genet.  16(1):11-22